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个人信息:Personal Information
硕士生导师
教师英文名称:Liuyi Dang
教师拼音名称:dangliuyi
电子邮箱:
所在单位:生命科学学院
学历:博士研究生毕业
性别:男
联系方式:dang@nwu.edu.cn
学位:理学博士学位
在职信息:在职
毕业院校:Ghent University
Comparative Study of Lectin Domains in Model Species: New Insights into Evolutionary Dynamics
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影响因子:0.0
发表刊物:International Journal of Molecular Sciences
摘要:Lectins are present throughout the plant kingdom and are reported to be involved in diverse biological processes. In this study, we provide a comparative analysis of the lectin families from model species in a phylogenetic framework. The analysis focuses on the different plant lectin domains identified in five representative core angiosperm genomes (Arabidopsis thaliana, Glycine max, Cucumis sativus, Oryza sativassp. japonica and Oryza sativa ssp. indica). The genomes were screened for genes encoding lectin domains using a combination of Basic Local Alignment Search Tool (BLAST), hidden Markov models, and InterProScan analysis. Additionally, phylogenetic relationships were investigated by constructing maximum likelihood phylogenetic trees. The results demonstrate that the majority of the lectin families are present in each of the species under study. Domain organization analysis showed that most identified proteins are multi-domain proteins, owing to the modular rearrangement of protein domains during evolution. Most of these multi-domain proteins are widespread, while others display a lineage-specific distribution. Furthermore, the phylogenetic analyses reveal that some lectin families evolved to be similar to the phylogeny of the plant species, while others share a closer evolutionary history based on the corresponding protein domain architecture. Our results yield insights into the evolutionary relationships and functional divergence of plant lectins.
论文类型:期刊论文
学科门类:理学
文献类型:J
是否译文:否
收录刊物:SCI